Papers

Yoshihito Ohmura

Department: Department of Botany, Division of Fungi and Algae
Degree: Doctor of Science
E-mail: ohmura-y@kahaku.co.jp
Information: researchmap（リンクを新しいタブで開きます）

Rodrigues, D., Clerc, P., Gerlach, A., Goward, T., Humbert, R., Jordan, S., Ohmura, Y., Pereira, I., Pouchon, C. and Naciri, Y. 2025. From one to five putative species: an unexpected high genetic diversity in Usnea flavocardia (lichenized Ascomycetes, Parmeliaceae) with the discovery of a new clade within the subgenus Usnea s.str. Plant and Fungal Systematics 70(2): 39–53.

Nakajima, A., Miyazawa, K. and Ohmura, Y. 2025. Koordersiella insectivora (Lophiotremataceae, Ascomycota), a lichenicolous fungus, new to Japan. Bulletin of the National Museum of Nature and Science, Series B 51(3): 91-96.

Kubo, K. and Ohmura, Y. 2025. Estimation of lichen growth rates using archived Google Street View images. The Bryologist 128(3) (in press).

Ohmura, Y. 2025. Notes on Miriquidica instrata (Lecanoraceae, Lichenized Ascomycota) from Japan. Bulletin of the National Museum of Nature and Science, Series B 51(1): 1-7.

Yahr, R., Allen, J. L., Atienza, V., Bungartz, F., Chrismas, N., Dal Forno, M., Degtjarenko, P., Ohmura, Y., Pérez-Ortega, S., Randlane, T., Reese Næsborg, R., Simijaca-Salcedo, D., von Hirschheydt, G., Anderson, F., Aptroot, A., Balderas, E., Borukhiyah, N., Chandler, A. M., Chesa, M. M., Divakar, P. K., García, R. A., Herrera-Campos, M. A., Howe, N., Joseph, S., Larsen, E. M., Lendemer, J. C., McMullin, R. T., Michlig, A., Moncada, B., Paulsen, J., Roa-García, F., Rosentreter, R., Scheidegger, C., Sparrius, L. B. and Stone, D. F. 2024. Red Listing Lichenized Fungi: Best Practices and Future Prospects. The Lichenologist 56: 345-362.

Zhurbenko, M. P., Tadome, K. and Ohmura, Y. 2024. Roselliniopsis falklandica sp. nov. and some other noteworthy species of lichenicolous fungi found in the TNS herbarium (Japan). Herzogia 37(2): 381-387.

Miyazawa, K. and Ohmura, Y. 2024. Discovery of a lichenized fungus in the family Chaetothyriaceae (Ascomycota), Ceramothyrium ryukyuense sp. nov. Plant and Fungal Systematics 69(2): 167-176.

Davydov, E., Ohmura, Y. and Yakovchenko, L. 2024. Umbilicaria ahtii – a new species of Umbilicaria subg. Papillophora from the vicinity of Helsinki with remarks to species of the Umbilicaria vellea group. The Lichenologist 56: 201-218.
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Miyazawa, K. and Ohmura, Y. 2024. Clypeoria, a new genus, with clypeate hyphophores separated from Gyalideopsis s. lat. (Gomphillaceae, lichenized Ascomycota). Opuscula Philolichenum 23: 20-32.(1.3 MB)

Ibuka, Y., Ota, Y., Matsukura, K. and Ohmura, Y. 2024. Recolonization of Parmotrema tinctorum (Parmeliaceae, lichenized Ascomycota) in the urban area of Kanagawa Prefecture, Japan. Bulletin of the National Museum of Nature and Science, Series B 50(1): 1-8.

Nakai, R., Munekawa, S., Murai, Y., Ohmura, Y. and Tani, K. 2024. Diversity profiling of microbiomes associated with selected alpine plants and lichens from Mt. Suisho, Japan. Microbiology Resource Announcements e01270-23

Clerc, P. and Ohmura, Y. 2023. Notes on the genus Usnea (lichenized Ascomycota, Parmeliaceae) V. Pland and Fungal Systematics 68: 340-352.

Gerlach, A., Clerc, P., Lücking, R., Moncada, B., Nobleza, J. C., Ohmura, Y. and Dal Forno, M. 2023. The genus Usnea (Parmeliaceae, Ascomycota) in the southern Philippines: a first phylogenetic approach. The Lichenologist 55: 451-480.

Miyazawa, K. and Ohmura, Y. 2023. Byssoloma orientale (Pilocarpaceae, Ascomycota), a new species from East Asia. The Lichenologist 55: 489-495.

Ohmura, Y. and Clerc, P. 2023. Usnea jezoformosana Y. Ohmura & P. Clerc, sp. nov. (Parmeliaceae, lichenized Ascomycota) from East Asia. Folia Cryptogamica Estonica 60: 47–55.

Miyazawa, K. and Ohmura, Y. 2023. Racoleus japonicus sp. nov. (Teratosphaeriaceae, Ascomycota), a new sterile filamentous lichen collected from Japan. Taiwania 68(4): 417-424.(1.4 MB)

Tadome, K. and Ohmura, Y. 2023. Three lichenicolous fungi on Physcia caesia collected near Syowa Station in East Antarctica. Journal of Japanese Botany 98(4): 198–204.【田留健介，大村嘉人．南極大陸東方の昭和基地周辺から採集された地衣類コフキシロムカデゴケ上の地衣生菌3種について】

Tadome, K., Ohmura, Y. and Yoshida, K. 2023. Sphaerellothecium araneosum and three lichenicolous fungi of Sclerococcum from Japan. Journal of Japanese Botany 98(2): 104-109.

Miyazawa, K., Ohmura, Y. and Okane, I. 2023. Gyalectidium setiferum (Gomphillaceae, Ascomycota), a foliicolous lichen, new to East Asia and its molecular phylogenetic position. Taiwania 68(1): 101-105.(1.1 MB)

Sugimoto, M. and Ohmura, Y. 2023. Lichens from Mugikusa Pass and the adjacent areas in Kita-Yatsugatake Mts, central Japan. Bulletin of the National Museum of Nature and Science, Series B 49(1): 1-16.

Miyazawa, K., Ohmura, Y., Yamaoka, Y. and Okane, I. 2023. Materials for the distribution of lichens in Japan (25) Coenogonium isidiatum. Journal of Japanese Botany 98(1): 37-41.

Hoffman, J. R., Karol, K. G., Ohmura, Y., Pogoda, C. S., Keepers, K. G., McMullin, R. T. and Lendemer, J. C. 2023. Mitochondrial genomes in the iconic reindeer lichens: Architecture, variation, and synteny across multiple evolutionary scales. Mycologia, DOI: 10.1080/00275514.2022.2157665

Ohmura, Y. 2023. Lichenes Minus Cogniti Exsiccati. Fasc. 29 (Nos. 701-725). National Museum of Nature and Science, Tokyo. 4 pp.(260.3 KB)

Davydov, E. A., Yakovchenko, L. S., Paukov, A. G., Ohmura, Y. 2022. Lithographa tesserata (Trapeliaceae, lichenized Ascomycota) new to Japan. Novosti Sistematiki Nizshikh Rastenii 56(2): 351-356.(902.0 KB)

Ohmura, Y. and Miyazawa, K. 2022. Materials for the distribution of lichens in Japan (24) Dyplolabia afzelii. Journal of Japanese Botany 97(5): 298-300.

Mueller, G. M., Cunha, K. M., May, T. W., Allen, J. L., Westrip, J. R. S., Canteiro, C., Costa-Rezende, D. H., Drechsler-Santos, E. R., Vasco-Palacios, A. M., Ainsworth, M., Alves-Silva, G., Bungartz, F., Chandler, A., Gonçalves, S. C., Krisai-Greilhuber, I., Iršėnaitė, R., Jordal, J. B., Kosmann, T., Lendemer, J., McMullin, R. T., Mešić, A., Motato-Vásquez, V., Ohmura, Y., Næsborg, R. R., Perini, C., Saar, I., Simijaca, D., Yahr, R., Dahlberg, A. 2022. What do the first 597 global fungal Red List assessments tell us about the threat status of fungi? Diversity 14(9), 736.

Tadome, K., Ohmura, Y. and Chaki, M. 2022. Spirographa pyramidalis (Spirographaceae, Ascomycota), a lichenicolous fungus, new to Japan. Journal of Japanese Botany 97(4): 212-215.

Dohi, T., Iijima, K., Machida, M., Suno, H., Ohmura, Y., Fujiwara, K., Kimura, S. and Kanno, F. 2022. Accumulation mechanisms of radiocaesium within lichen thallus tissues determined by means of in situ microscale localisation observation. PLoS ONE 17(7): e0271035.

Frisch, A., Ohmura, Y., Holien, H. and Bendiksby, M. 2022. A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato. Taxon 71: 936-962.

Sugimoto, M. and Ohmura, Y. 2022. Pyrgillus mammosus (Pyrenulaceae, lichenized Ascomycota), a new species from Taiwan. Taiwania 67(2): 267-270.

Yakovchenko, L. S., Davydov, E. A. and Ohmura, Y. 2022. Candelariella xanthostigmoides (Candelariaceae, Ascomycota) – a new lichen record to East Asia from Japan. Turczaninowia 25, 1: 124–128.(2.3 MB)

Galanina, I. A. and Ohmura, Y. 2022. Rinodina endospora and R. macrospora (Physciaceae, lichenized Ascomycota), new to Japan. Novosti Sistematiki Nizshikh Rastenii 56(1): 97–102.

Ohmura, Y., Sugimoto, M., Yakovchenko, L. and Davydov, E. A. 2022. Additional species and ITS rDNA data for the lichen mycota of the Imperial Palace Grounds, Tokyo, Japan. Bulletin of the National Museum of Nature and Science, Series B 48: 1-16.

Tadome, K. and Ohmura, Y. 2022. Six lichenicolous fungi new to Japan collected from montane to subalpine area. Journal of Japanese Botany 97: 23–32.

Miyazawa, K., Ohmura, Y. and Yamaoka, Y. 2022. Noteworthy foliicolous lichens collected from Iriomote Island, southern Japan. Taiwania 67: 155-163.

Ohmura, Y. 2022. Lichenes Minus Cogniti Exsiccati. Fasc. 28 (Nos. 676-700). National Museum of Nature and Science, Tokyo. 4 pp.(213.6 KB)

Ezhkin, A. and Ohmura, Y. 2021. Notes to Pannariaceae species in Taiwan. Taiwania 66: 575-579.(954.6 KB)

Ohmura, Y., Frisch, A., Sugimoto, M., Aung, M. M. and Tanaka, N. 2021. Contribution to the knowledge of the lichen mycota of Myanmar (II) Heterocyphelium triseptatum (Lecanographaceae) newly recorded from Asia and its molecular phylogenetic position. Taiwania 66: 569-574.(1.1 MB)

Dohi, T., Ohmura, Y., Yoshimura, K., Sasaki, T., Fujiwara, K., Kanaizuka, S., Nakama, S. Iijima, K. 2021. Radiocaesium accumulation capacity of epiphytic lichens and adjacent barks collected at the perimeter boundary site of the Fukushima Dai-ichi Nuclear Power Station. PLoS ONE 16(5): e0251828. https://doi.org/10.1371/journal.pone.0251828.

Galanina, I. A., Yakovchenko, L. S., Zheludeva, E. V. and Ohmura, Y. 2021. The genus Rinodina (Physciaceae, lichenized Ascomycota) in the Magadan Region (Far East of Russia). Novosti Sistematiki Nizshikh Rastenii 55(1): 97–119.

Suno, H., Machida, M., Dohi, T and Ohmura, Y. 2021. Quantum chemical calculation studies toward microscopic understanding of retention mechanism of Cs radioisotopes and other alkali metals in lichens. Scientific Reports 11, 8228.

Ohmura, Y. and Clerc, P. 2021. Usnea esperantiana (Parmeliaceae, lichenized Ascomycota) new to Asia. Bulletin of the National Museum of Nature and Science, Series B 47: 13-20.(951.0 KB)

Tadome, K. and Ohmura, Y. 2021. Two Lichenicolous Fungi, Illosporium carneum and Ovicuculispora parmeliae (Bionectriaceae, Ascomycota), New to Japan. Bulletin of the National Museum of Nature and Science, Series B 47: 21-25.(677.5 KB)

Ohmura, Y. 2021. Lichenes Minus Cogniti Exsiccati. Fasc. 27: 1–4. National Museum of Nature and Science.(629.7 KB)

Galanina, I. A., Ezhkin, A. K. and Ohmura, Y. 2021. The genus Rinodina of the Sakhalin Island (Far East Russia). Botanicheskii Zhurnal 106(2): 147–165.

Zhurbenko, M. P. and Ohmura, Y. 2020. Contributions to the knowledge of lichenicolous fungi growing on baeomycetoid lichens and Icmadophila, with a key to the species. The Lichenologist 52: 437–453.

Yakovchenko, L., Davydov, E. A., Paukov, A., Konoreva, L., Chesnokov, S. and Ohmura, Y. 2020. New records of arctic-alpine lichens from the Russian Far East. Herzogia 33(2): 455-472.

Ohmura, Y. 2020. Usnea nipparensis and U. sinensis form a 'species pair' presuming morphological, chemical and molecular phylogenetic data. Plant and Fungal Systematics 65(2): 265–271.

Ohmura, Y., Sugimoto, M., Aung, M. M. and Tanaka, N. 2020. Contribution to the Knowledge of the Lichen Mycota of Myanmar (I) Twenty Species Newly Recorded from Southern Myanmar. Taiwania 65: 548-558.

Kono, M., Kon, Y., Ohmura, Y., Satta, Y. and Terai, Y. 2020. In vitro resynthesis of lichenization reveals the genetic background of symbiosis specific fungal-algal interaction in Usnea hakonensis. BMC Genomics 21: 671.

Yakovchenko, L., Davydav, E. A., Paukov, A. and Ohmura, Y. 2020. Porpidinia brevispora, a new species and the second representative of the genus Porpidinia (Porpidiaceae, Lecanorales) from the Russian Far East. Phytotaxa 459: 75–80.

Miyazawa, K., Ohmura, Y. and Yamaoka, Y. 2020. Aulaxina microphana (Graphidaceae, lichenized Ascomycota), new to Japan. Journal of Japanese Botany 95: 154-157.

Frisch, A., Tadome, K., Moon, K. H., Thor, G. and Ohmura, Y. 2020. Arthonia phaeophysciae (Arthoniaceae, Ascomycota), new to Japan. Journal of Japanese Botany 95: 133-140.

Konoreva, L., Chesnokov, S., Yakovchenko, L., Ohmura, Y. and Davydov, E. 2020. New records to the lichen biota of Russia, 1 - Sakhaline Region, with new records for the Russian Far East and the Asian part of Russia. Botanica Pacifica 9: 1-13.

Ludwig, L., Kantvilas, G., Nilsen, A., Orlovich, D., Ohmura, Y., Summerfield, T., Wilk, K. and Loard, J. 2020. A molecular-genetic reassessment of the circumscription of the lichen genus Icmadophila. Lichenologist 52: 213-220.

Hoffman, J. R., Ohmura, Y. and Lendemer, J. C. 2020. Combing for beach broccoli: surveys of the endemic macrolichen Cladonia submitis determines endangered status under IUCN guidelines. Biodiversity and Conservation. DOI 10.1007/s10531-020-01983-x

Ohmura, Y. 2020. Lichenes Minus Cogniti Exsiccati. Fasc. 26: 1–4. National Museum of Nature and Science.

Ohmura, Y. 2020. New localities of Ropalospora phaeoplaca in Japan and Far East of Russia with ITS nrDNA sequences. Bulletin of the National Museum of Nature and Science, Series B (Botany) 46: 1-7.(1.7 MB)

Ohmura, Y. and Sugimoto, M. 2019. Lichens of the Garden of the Institute for Nature Study, National Museum of Nature and Science, Shiroganedai, Tokyo. II. Miscellaneous Reports of the Institute for Nature Study 51: 225–234.(1.6 MB)

Masumoto, H., Ohmura, Y. and Degawa, Y. 2019. Lichenomphalia meridionalis (Hygrophoraceae, lichenized Basidiomycota) new to Asia. Opuscula Philolichenum 18: 379-389.(1.1 MB)

Yakovchenko, L., Davydov, E., Paukov, A. and Ohmura, Y. 2019. New records of lichens from the Russian Far East. I. Fuscidea submollis and other arctic-alpine species. Turczaninowia 22: 91-96.

Dohi, T., Tagomori, H., Ohmura, Y., Fujiwara, K., Kanaizuka, S. and Iijima, K. 2019. Electron microscopic analysis of radiocaesium-bearing microparticles in lichens collected within 3 km of the Fukukshima Dai-ichi Nuclear Power Plant. In: Evans, N. (ed.). Environmental Radiochemical Analysis VI. pp. 58-70.

Zhurbenko, M. P. and Ohmura, Y. 2019. New and interesting records of lichenicolous fungi from the TNS herbarium: part I. Opuscula Philolichenum 18: 74–89.(442.2 KB)

Ohmura, Y. and Clerc, P. 2019. Lectotypification of Usnea confusa (Parmeliaceae, Ascomycota). Bulletin of the National Museum of Nature and Science, Series B (Botany) 45: 63-70.(1.9 MB)

Masumoto, H., Ohmura, Y. and Degawa, Y. 2019. Phaeocalicium polyporaeum (Mycocaliciaceae, Ascomycota) new to Japan. Journal of Japanese Botany 92: 96-102.

Ohmura, Y. 2019. Lichenes Minus Cogniti Exsiccati. Fasc. 25: 1–4. National Museum of Nature and Science.

Ohmura, Y., Takeshita, S. and Kawachi, M. 2019. Photobiont diversity within populations of a vegetatively reproducing lichen, Parmotrema tinctorum, can be generated by photobiont switching. Symbiosis 77: 59-72. https://doi.org/10.1007/s13199-018-0572-1

Yakovchenko L. S., Davydov E. A., Ohmura Y. and Printzen C. 2018. The phylogenetic position of species of Lecanora s. lat. containing calycin and usnic acid, with the description of Lecanora solaris Yakovchenko & Davydov sp. nov. Lichenologist 51: 147-156.

Frish, A., Thor, G., Moon, K. H. and Ohmura, Y. 2018. Galbinothrix, a new monotypic genus of Chrysotrichaceae (Arthoniomycetes) lacking pulvinic acid derivatives. Plant and Fungal Systematics 63: 31-37.(1.2 MB)

Yakovchenko, L. S., Zheludeva, E. V., Ohmura, Y. and Davydov, E. A. 2018. Lecanora somervellii - new lichen for Russia from Magadan Region. Turczaninowia 21(4): 35–39.

Tadome, K., Ohmura, Y. and Frisch, A. 2018. Arthonia molendoi (Arthoniaceae, Ascomycota), a lichenicolous fungus, new to Japan. Journal of Japanese Botany 93: 407-409.

Zhurbenko, M. P. and Ohmura, Y. 2018. Contributions to the knowledge of lichenicolous fungi on Thamnolia. Opuscula Philolichenum 17: 368-373.

Zhurbenko, M. P., Tadome, K. and Ohmura, Y. 2018. Pronectria japonica sp. nov. and a key to the lichenicolous fungi and lichens growing on Ochrolechia. Herzogia 31: 494-504.

Ohmura, Y. 2018. Lichenes Minus Cogniti Exsiccati. Fasc. 24: 1–4. National Museum of Nature and Science.

Hosoya, T., Hosaka, K. and Ohmura, Y. 2018. Waterfoam mycobiota collected in Kita-Iwojima Island, Ogasawara Islands. Bulletin of the National Museum of Nature and Science, Series B (Botany) 44: 115-120.

Zhurbenko, M. P. and Ohmura, Y. 2018. Perigrapha cetrariae, a new lichenicolous ascomycete on Cetraria from Japan. Folia Cryptogamica Estonica 55: 17-19.

Frisch, A., Grube, M., Kashiwadani, H. and Ohmura, Y. 2018. Arthoniaceae with reddish, K+ purple ascomata in Japan. Phytotaxa 356: 19-33.

Ohmura, Y., Chaki, M., Takeshita, S., Kono, M., Kurogi, S. and Kashiwadani, H. 2018. Increase of Thysanothecium scutellatum (Cladoniaceae, Ascomycota) in Japan. Bulletin of the National Museum of Nature and Science, Series B (Botany) 44: 1-6.(405.6 KB)

Ohmura, Y. 2017. Lichenes Minus Cogniti Exsiccati. Fasc. 23: 1–4. National Museum of Nature and Science.

Frisch, A., Thor, G., Moon, K. H. and Ohmura, Y. 2017. Arthonia incarnata (Arthoniaceae), a rare and poorly known old-growth forest lichen new to Asia. Nordic Journal of Botany 35: 587-594.

Ohmura, Y., Randlane, T. and Spribille, T. 2018. Lethariella togashii. The IUCN Red List of Threatened Species 2018: e.T71605769A71605853.

Kono, M., Tanabe, H., Ohmura, Y., Satta, Y. and Terai, Y. 2017. Physical contact and carbon transfer between a lichen-forming Trebouxia alga and a novel Alphaproteobacterium. Microbiology 163: 678-691. doi: 10.1099/mic.0.000461

Zhurbenko, M. P., Ezhkin, A. K., Skirina, I. F. and Ohmura, Y. 2017. Dactylospora anziae, a new lichenicolous ascomycete on Anzia from East Asia. Folia Crypogamica Estonica 54: 13-16.

Ohmura, Y. and Seaward, M.R.D. 2017. Is Glyphis cicatricosa an indicator for 'global warming' or an 'urban heat island' effect in Japan? The Lichenologist 49: 291-296.

Ohmura, Y., Skirina, I. and Skirin, F. 2017. Contribution to the knowledge of the genus Usnea (Parmeliaceae, Ascomycota) in southern Far East Russia. Bulletin of the National Museum of Nature and Science, Series B (Botany) 43: 1–10.(578.9 KB)

Yakovchenko, L., Vondrak, J., Ohmura, Y., Korchikov, E.S., Vondrakova O.S. and Davydov, E.A. 2017. Candelariella blastidiata sp. nov. (Ascomycota, Candelariaceae) from Eurasia and North America and a key for grey thalli Candelariella. The Lichenologist 49: 117-126.

Ohmura, Y. 2016. Lichenes Minus Cogniti Exsiccati. Fasc. 22: 1–4. National Museum of Nature and Science.

Ohmura, Y., Kindaichi, H. and Yoshida, K. 2016. Materials for the distribution of lichens in Japan (21) Toninia tristis subsp. fujikawae. Journal of Japanese Botany 91: 362-364.

Davydov, E. and Ohmura, Y. 2016. Lectotypification of the name Umbilicaria esculenta (Umbilicariaceae, lichenized Ascomycota). Mycotaxon 131: 407-412.

Ohmura, Y. and Mayrhofer, H. 2016. Protothelenella sphinctrinoides (Protothelenellaceae) new to Japan and new chemical features for several species in the genus. Herzogia 29: 137-142.

Yakovchenko, L., Davydov, E. and Ohmura, Y. 2016. Candelariella placodizans (Candelariaceae) reported new to mainland China and Taiwan based on morphological, chemical and molecular phylogenetic analyses. Taiwania 61: 159-164.(687.1 KB)

Kasai, Y., Ohmura, Y., Moon, K.H., Kobayashi, K. and Kashiwadani, H. 2016. Distributions of some Usnea species in Shiga Prefecture, Japan. Bull. Shiga Soc. Nat. 14: 1–10.

Ohmura, Y., Mizobuchi, A., Handa, S. and Lücking, R. 2016. Coenogonium moniliforme (Coenogoniaceae, lichenized Ascomycota) new to Japan, with taxonomic notes of the photobiont in culture. Journal of Japanese Botany 91: 74-78.

Ohmura, Y. and Frisch, A. 2016. Sporodophoron primorskiense (Arthoniaceae, lichenized Ascomycota) new to Japan, as the second locality in the world. Journal of Japanese Botany 91: 69-73.

Ohmura, Y., Frisch, A., Lendemer, J. C. and Nakanishi, M. 2016. Lichens of Mikura-jima Island, Izu Islands, central Japan. Bulletin of the National Museum of Nature and Science, Series B (Botany) 42: 1-18.(1.7 MB)

Zhurbenko, M. P., Frisch, A., Ohmura, Y. and Thor, G. 2015. Lichenicolous fungi from Japan and Korea: new species, new records and a first synopsis for Japan. Herzogia 28: 762-789.

Divakar, P.K.,Crespo, A., Wedin, M., Leavitt, S.D., Hawksworth, D.L., Myllys, L., McCune, B., Randlane, T., Bjerke, J.W., Ohmura, Y., Schmitt, I., Boluda, C.G., Alors, D., Roca-Valiente, B., Del-Prado, R., Ruibal, C., Buaruang, K., Núñez-Zapata, J., Amo de Paz, G., Rico, V.J., Molina, M.C., Elix, J.A., Esslinger, T.L., Tronstad, I.K., Lindgren, H., Ertz, D., Gueidan, C., Saag, L., Mark, K., Singh, G., Dal Grande, F., Parnmen, S., Beck, A., Benatti, M.N., Blanchon, D., Candan, M., Clerc, P., Goward, T., Grube, M., Hodkinson, B.P., Hur, J.S., Kantvilas, G., Kirika, P.M., Lendemer, J., Mattsson, J.E., Messuti, M.I., Miadlikowska, J., Nelsen, M., Ohlson, J.I., Pérez-Ortega, S., Saag, A., Sipman, H.J., Sohrabi, M., Thell, A., Thor, G., Truong, C., Yahr, R., Upreti, D.K., Cubas, P. and Lumbsch, T.H. 2015. Evolution of complex symbiotic relationships in a morphologically derived family of lichen-forming fungi. New Phytologist 208: 1217-1226.doi: 10.1111/nph.13553

Frisch, A., Ohmura, Y., Ertz, D. and Thor, G. 2015. Inoderma and related genera in Arthoniaceae with elevated white pruinose pycnidia or sporodochia. Lichenologist 47: 233-256.http://dx.doi.org/10.1017/S0024282915000201

Leavitt, S. D., Divakar, P. K., Ohmura, Y., Wang, L., Esslinger, T. L. and Lumbsch, H. T. 2015. Who’s getting around? Assessing species diversity and phylogeography in the widely distributed lichen-forming fungal genus Montanelia (Parmeliaceae, Ascomycota). Molecular Phylogenetic and Evolution 90: 85-96.http://dx.doi.org/10.1016/j.ympev.2015.04.029

Dohi, T., Ohmura, Y., Kashiwadani, H., Fujiwara, K., Sakamoto, Y. and Iijima, K. 2015. Radiocaesium activity concentrations in parmelioid lichens within a 60 km radius of the Fukushima Dai-ichi Nuclear Power Plant. Journal of Environmental Radioactivity 146: 125-133.http://dx.doi.org/10.1016/j.jenvrad.2015.04.013(712.1 KB)

Ohmura, Y. 2015. Lichenes Minus Cogniti Exsiccati. Fasc. 21: 1–4. National Museum of Nature and Science.(260.7 KB)

Frisch, A. and Ohmura, Y. 2015. The phylogenetic position of Normandina simodensis (Verrucariaceae, lichenized Ascomycota). Bulletin of the National Museum of Nature and Science, Series B 41: 1-7.(1.1 MB)

Tokizawa, M., Ohmura, Y., Moon, K. H. and Takeshita, S. 2015. Sarcogyne endopetrophila (Acarosporaceae, lichenized Ascomycota), a new species from Japan. Journal of Japanese Botany 90: 46-51.

Davydov, E., Yakovchenko, L. and Ohmura, Y. 2015. The new lectotypification of Umbilicaria kisovana (Umbilicariaceae, lichenized Ascomycota). Mycotaxon 129(2): 415-419.http://dx.doi.org/10.5248/129.415

Ohmura, Y., Matsukura, K., Abe, J.P., Hosaka, K., Tamaoki, M., Dohi, T., Kakishima, M. and Seaward, M.R.D. 2015. 137Cs concentrations in foliose lichens within Tsukuba-city as a reflection of radioactive fallout from the Fukushima Dai-ichi Nuclear Power Plant accident. Journal of Environmental Radioactivity 141: 38-43.http://dx.doi.org/10.1016/j.jenvrad.2014.11.014

Kon, Y. and Ohmura, Y. 2014. Regeneration of Pseudocyphellaria aurata transplanted on a tree in Japan. Lichenologist 46: 833-836.http://dx.doi.org/10.1017/S0024282914000450

Ohmura, Y., Yakovchenko, L. and Zhurbenko M. P. 2014. Carbonea vitellinaria new to Japan, with a key to lichenicolous fungi growing on species of Candelariella. Mycosphere 5: 607-611.http://dx.doi.org/10.5943/mycosphere/5/5/1(521.5 KB)

Ohmura, Y., Nadyeina, O. and Scheidegger, C. 2014. Gymnoderma insulare. The IUCN Red List of Threatened Species 2014: e.T58520980A58520984. http://dx.doi.org/10.2305/IUCN.UK.2014-3.RLTS.T58520980A58520984.en

Fedrowitz, K., Frisch, A., Kaasalainen, U. and Ohmura, Y. 2014. Nephroma squamigerum (Nephromataceae, lichenized Ascomycota) is a distinct species. Journal of Japanese Botany 89: 346-354.

Ohmura, Y. 2014. Usnea flavocardia (Parmeliaceae, lichenized Ascomycota) new to Asia. Bulletin of the National Museum of Nature and Science, Series B 40: 69-72.(577.4 KB)

Ohmura, Y. 2014. Lichenes Minus Cogniti Exsiccati. Fasc. 20: 1–4. National Museum of Nature and Science.(234.2 KB)

Ohmura, Y., Thor, G., Frisch, A., Kashiwadani, H. and Moon, K. H. 2014. Increase of lichen diversity in the Imperial Palace Grounds, Tokyo, Japan. Mem. Natl. Mus. Nat. Sci., Tokyo (49): 193-217.(379.9 KB)

Handa, S., Frisch, A. and Ohmura, Y. 2014. Morphology of trentepohlialean photobionts isolated from Arthoniales of the Imperial Palace Grounds, Tokyo, Japan. Mem. Natl. Mus. Nat. Sci., Tokyo, (49):219-226. [In Japanese and English abstract.](900.1 KB)

Iwashina, T., Higuchi, M., Kadota, Y., Tanaka, N., Hosoya, T., Hosaka, K., Ohmura, Y., Tuji, A. and Kitayama, T. 2014. Flora and fauna of the Imperial Palace, Tokyo II. Flora. Mem. Natl. Mus. Nat. Sci., Tokyo, (49): 1-9.

Roca-Valiente, B., Divakar, P. K., Ohmura, Y., Hawksworth, D. L. and Crespo, A. 2013. Molecular phylogeny supports the recognition of the two morphospecies Parmotrema pseudotinctorum and P. tinctorum (Parmeliaceae, Ascomycota). Vieraea 41: 333-348.

Handa, S., Horiguchi, T., Ohmura, Y. and Higuchi, M. 2013. Rufusiella insignis (Gloeodiniaceae, Phytodiniales), an aerial Dinoflagellate newly found in Japan. Hikobia 16: 311-314.

Ohmura, Y., Yoshida, K. and Kashiwadani, H. 2013. Lectotypification of Cetraria kurokawae Shibuichi & K. Yoshida. Bulletin of the National Museum of Nature and Science, Series B 39: 147-149.(883.6 KB)

Ohmura, Y., Hosaka, K., Kasuya, T., Abe, J. P. and Kakishima, M. 2013. Activity concentrations of radionuclides in lichens following the Fukushima Nuclear accident. Lichenologist 45: 685-689.http://dx.doi.org/10.1017/S0024282913000431

Moon, K.-H., Ohmura, Y., Kashiwadani, H. and Yoshida, K. 2013. Materials for the distribution of lichens in Japan (20) Flavopunctelia flaventior and F. soredica. Journal of Japanese Botany 88: 258-260.

Ohmura, Y. 2013. Lichenes Minus Cogniti Exsiccati. Fasc. 19: 1–4. National Museum of Nature and Science.(261.7 KB)

Frisch, A. and Ohmura, Y. 2013. Opegrapha phaeophysciae (Opegraphaceae, Arthoniomycetes), a lichenicolous ascomycete, new to Japan. Bulletin of the National Museum of Nature and Science, Series B 39: 11-14.(2.6 MB)

Kashiwadani, H., Nakanishi, M., Miyawaki, H., Takeshita, S., Ohmura, Y., Tokizawa, M. and Moon, K. H. 2012. Materials for the Distribution of Lichens in Japan (19) Leiorreuma yakushimense (M.Nakan.) M.Nakan. & Kashiw. and Siphula decumbens Nyl. Journal of Japanese Botany 87: 408-411.

Frisch, A. Y. Ohmura, Y. 2012. Chapsa leprieurii, Ocellularia cavata and O. pyrenuloides (Graphidaceae, lichenized Ascomycota) new to Japan. Bull. Natl. Mus. Nat. Sci., Ser. B 38: 87-92.(525.6 KB)

Ohmura, Y. and Moon, K.-H. 2012. Materials for the distribution of lichens in Japan (18) Baeomyces sanguineus Asahina. Journal of Japanese Botany 87(4): 293-294.

Ohmura, Y. 2012. A synopsis of the lichen genus Usnea (Parmeliaceae, Ascomycota) in Taiwan. Mem. Natl. Mus. Nat. Sci., Tokyo (48): 91-137.(4.5 MB)

Ohmura, Y. 2012. Lichenes Minus Cogniti Exsiccati. National Museum of Nature and Science. Fasc. 18: 1-4.(415.6 KB)

Ohmura, Y., Kashiwadani, H. and Moon, K.-H. 2012. Recovery of macrolichen flora in the Imperial Palace Ground, Tokyo, Japan. Journal of Japanese Botany 87: 55-61.

Ohmura, Y. 2011. Notes on eight threatened species of lichens in Japan. Bull. Natl. Mus. Nat. Sci., Ser. B, 37: 57-61.(2.5 MB)

Hosoya, T., Hosaka, K. and Ohmura, Y. 2011. Preliminary mycobiota assesment on Kita-Iwojima Island, Ogasawara Islands. Mem. Natl. Sci. Mus., Tokyo (47): 405-410.(2.0 MB)

Ohmura, Y. 2011. Lichenes Minus Cogniti Exsiccati. National Museum of Nature and Science. Fasc. 17: 1-4.(55.0 KB)

Ohmura, Y. and Onimaru, K. 2010. Materials for the distribution of lichens in Japan (16) Usnea filipendula Stirt. Journal of Japanse Botany 85: 190-192.

Kon, Y. and Ohmura, Y. 2010. Regeneration of juvenile thalli from transplanted soredia of Parmotrema clavuliferum and Ramalina yasudae. Bull. Natl. Mus. Nat. Sci., Ser. B 36: 65-70.(1.1 MB)

Ohmura, Y. 2010. Lichenes Minus Cogniti Exsiccati. Fasc. 16, Nos. 376-400. National Museum of Nature and Science, Tokyo.(97.2 KB)

Ohmura, Y., Lin, C.-K. and Wang, P.-H. 2010. Three sorediate species of the genus Usnea (Parmeliaceae, Ascomycota) new to Taiwan. Mem. Natl. Mus. Nat. Sci., Tokyo (46): 69-76.(171.5 KB)

Ohmura, Y., Kawachi, M., Kasai, F., Sugiura, H., Ohtara, K., Kon, Y. and Hamada, N. 2009. Morphology and chemistry of Parmotrema tinctorum (Parmeliaceae. lichenized Ascomycota) transplanted into sites with different air pollution levels. Bull. Natl. Mus. Nat. Sci., Ser. B 35: 91-98.(1.6 MB)

Kon, Y. & Y. Ohmura, 2008. Transplantation experiment using lichen thallii of Parmotrema tinctorum for environmental education. Jpn. J. Biol. Educ., 48:221-228.

Ohmura, Y. 2008. Taxonomy and molecular phylogeny of Usnea rubicunda and U. rubrotincta (Parmeliaceae, lichenized Ascomycotina). Journal of Japanese Botany 83: 347-355.

Ohmura, Y., 2008. Notes on the evolutionary relationship between lichenized fungus and its photobiont inferred from analyses of their genetic diversity. Bunrui, 8:123-128.

Ohmura, Y., Moon, K. H. and Kashiwadani, H. 2008. Morphology and molecular phylogeny of Ramalina pollinaria, R. sekika and R. yasudae (Ramalinaceae, lichenized Ascomycotina). Journal of Japanese Botany 83: 156–163.

Ohmura, Y., M. Kawachi, K. Ohtara & K. Sugiyama, 2008. Long-term monitoring of Parmotrema tinctorum and qualitative changes of air pollution in Shimizu Ward, Shizuoka City, Japan. J. Jpn. Soc. Atmos. Environ., 43:47–54.

Handa, S., Y. Ohmura, T. Nakano & M. Nakahara-Tsubota, 2007. Airborne micro green algae (Chlorophyta) in snowfall. Hikobia, 15:109–120.

Ohmura, Y., Kawachi, M., Kasai, F., Watanabe, M. M. and Takeshita, S. 2006. Genetic combinations of symbionts in a vegetatively reproducing lichen, Parmotrema tinctorum, based on ITS rDNA sequences. Bryologist 109: 43–59.

Ohmura, Y. and Kanda, H. 2004. Taxonomic status of Section Neuropogon in the genus Usnea elucidated by morphological comparisons and ITS rDNA sequences. Lichenologist 36: 217–225.

Ohmura, Y. & S. Kurogi, 2004. Lichens of Mt. Kirishima, Kyushu, Japan. Miyazaki Pref. Mus. Nat. Hist. Gen. Res. Rep., pp.203-212.

Ohmura, Y., Kurogi，S. and Kashiwadani, H. 2003. Materials for the Distribution of Lichens in Japan (13). Jouranla of Japanese Botany 78: 175–177. [Leptogium pseudopapillosum]

Ohmura, Y. 2002. Phylogenetic evaluation of infrageneric groups of the genus Usnea based on ITS regions in rDNA. J. Hattori Bot. Lab. 92: 231–243.

Ohmura, Y. 2001. Taxonomic study of the genus Usnea (lichenized Ascomycetes) in Japan and Taiwan. J. Hattori Bot. Lab. 90: 1–96.

Ohmura, Y., Moon, K. H. and Kashiwadani, H. 2000. Usnea fragilescens Lynge (Parmeliaceae, lichenized Ascomycetes) new to Japan. Journal of Japanse Botany 75: 303–307.

Ohmura, Y. and H. Kashiwadani, 2000. Usnea subfloridana Stirt. (Parmeliaceae) and its related species in eastern Asia. Journal of Japanese Botany 75: 164–177.

Kashiwadani, H., Ohmura, Y. and Umezu, Y. 1998. Lichens of Mt. Hikosan and its adjacent area, Kyushu, Japan. Mem. Natn. Sci. Mus., Tokyo (30): 73–92.(1.5 MB)

Ohmura, Y. 1997. Common lichens of Bihoro area. Bull. Bihoro Mus., 5:37-42.

Ohmura, Y. and Kashiwadani, H. 1997. Lichens of Mt. O-akan and its adjacent areas, Hokkaido, Japan. Bull. Natn. Sci. Mus., Tokyo, Ser. B 23: 1–24.(2.0 MB)

Ohmura, Y. & M. Nakanishi, 1996. Studies on relationship between the growth positions and the microclimates of lichens on stone wall in a rice field, Hiroshima, Japan. Hikobia, 12:61–68.